miRBase entry: bdi-MIR7728

Stem-loop bdi-MIR7728


Accession
MI0025343
Description
Brachypodium distachyon bdi-MIR7728 precursor miRNA


Sequence

ccccuaggccUGCUCGGAUUGAGUGUAUUUUuaguggggggcugguacuuaguuaccaacccccaacuaaAAAUACACUCAAUUCAAGCAGcuggcccuuaauug
......((((((((.((((((((((((((((((((.(((((.(((((......))))).))))).)))))))))))))))))))).))))...))))........

Structure
--ccccua    ---    C                    g     c     cu 
        ggcc   UGCU GGAUUGAGUGUAUUUUuagu ggggg uggua  u
        ||||   |||| |||||||||||||||||||| ||||| |||||   
        ccgg   ACGA CUUAACUCACAUAAAaauca ccccc accau  a
guuaauuc    ucG    A                    a     a     ug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
2: 9800174-9800278 [+]

Database links

Mature bdi-miR7728-5p

Accession MIMAT0030188
Description Brachypodium distachyon bdi-miR7728-5p mature miRNA
Sequence 11 - UGCUCGGAUUGAGUGUAUUUU - 31
Evidence experimental
Illumina [1]

Mature bdi-miR7728-3p

Accession MIMAT0030189
Description Brachypodium distachyon bdi-miR7728-3p mature miRNA
Sequence 71 - AAAUACACUCAAUUCAAGCAG - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443