Stem-loop bdi-MIR7717b

Accession

MI0025334

Description

Brachypodium distachyon bdi-MIR7717b precursor miRNA

Gene family

MIPF0001715; MIR7717

Sequence

uuuugcuauuUCUAAGACGACUGAGAAAUAACUAuaucuaagucgacccuaacaaccauucgauccaucacugagauucgugcaaaauucauauaagcauaagcaaugaaaaaaucuuaauugaaugguuaugaucgucgacugagaaauAACUAUUUUUAAGUUGACCGAGAAauagacauucc
...((((((((((..(.(((((.(((((((..(((.(((.(((((((......(((((((((((.......((((((((((((...................)).))))....)))))))))))))))))......))))))).))).)))..))))))).))))).)..)))))))).))....

Structure

-uuu  -        AA A     G       AC   a   a       ccuaac           ccaucac      ----    -  aaaauuca 
    ug cuauuUCU  G CGACU AGAAAUA  UAu ucu agucgac      aaccauucgau       ugagau    ucgu gc        u
    || ||||||||  | ||||| |||||||  ||| ||| |||||||      |||||||||||       ||||||    |||| ||        a
    ac gauaAAGA  C GUUGA UUUUUAU  Aua aga ucagcug      uugguaaguua       auucua    agua cg        u
ccuu  a        GC A     A       CA   a   g       cuagua           -------      aaaa    a  aauacgaa 

Annotation confidence Not enough data

Genome context

3: 35252490-35252674 [+]

Mature bdi-miR7717b-5p

• Accession: MIMAT0030168
• Description: Brachypodium distachyon bdi-miR7717b-5p mature miRNA
• Sequence: 11 - UCUAAGACGACUGAGAAAUAACUA - 34
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7717b-3p

• Accession: MIMAT0030169
• Description: Brachypodium distachyon bdi-miR7717b-3p mature miRNA
• Sequence: 151 - AACUAUUUUUAAGUUGACCGAGAA - 174
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443