miRBase entry: bdi-MIR7710

Stem-loop bdi-MIR7710


Accession
MI0025321
Description
Brachypodium distachyon bdi-MIR7710 precursor miRNA


Sequence

ugguccuucgcUACUACAGAUCGUGAUGUCAACUUugaaaaauuauuccgagcacaccuagcgacgcugguaccuaccauaaccucuucaucuagcuaggguauaaagagugacuaaugaagauaugguagguaucgacgaugcuagaugugcucagaaugauguuucaaaAUUGAUGUCACAAACUAUAGUAGCgaaggaccaac
((((((((((((((((.((...((((((((((.(((((((.(((((((.(((((((.((((((.((.((((((((((((((...(((((((.((((...............).)))))))))))))))))))))))).)).)))))).))))))).))))))).))))))).))))))))))...)).))))))))))))))))..

Structure
--                C  AUC          C       a       c       c      a  c              acc       c   - uagggu 
  ugguccuucgcUACUA AG   GUGAUGUCAA UUugaaa auuauuc gagcaca cuagcg cg ugguaccuaccaua   ucuucau uag c      a
  |||||||||||||||| ||   |||||||||| ||||||| ||||||| ||||||| |||||| || ||||||||||||||   ||||||| ||| |      u
  accaggaagCGAUGAU UC   CACUGUAGUU aaacuuu uaguaag cucgugu gaucgu gc gcuauggaugguau   agaagua auc g      a
ca                A  AAA          A       g       a       a      a  a              ---       -   a ugagaa 


Annotation confidence Not enough data
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Genome context
4: 46018159-46018364 [+]

Database links

Mature bdi-miR7710-5p

Accession MIMAT0030137
Description Brachypodium distachyon bdi-miR7710-5p mature miRNA
Sequence 12 - UACUACAGAUCGUGAUGUCAACUU - 35
Evidence experimental
Illumina [1]

Mature bdi-miR7710-3p

Accession MIMAT0030138
Description Brachypodium distachyon bdi-miR7710-3p mature miRNA
Sequence 172 - AUUGAUGUCACAAACUAUAGUAGC - 195
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443