Stem-loop bdi-MIR7707

Accession

MI0025318

Description

Brachypodium distachyon bdi-MIR7707 precursor miRNA

Sequence

caaugggaccGUUCAGCCAUACAUCGAUCGAAGCagagacaacguaauacgagcaguggccaacggcggccgcggaggagcggcgaggaaucggagcacggaggcggcgcggaaccuagccaggacgcggcgcuuggagaggcuugccagggcaaggcugaaccaagcuagagcucgcgccgacauucuagaaggugauugacuaccuacuccauuauaccacuacucguacuacguugucuuugcUUUGAUCGAUGUAUGGCUGAACGGucucauugcua
((((((((((((((((((((((((((((((((((((((((((((((.((((((.(((((.........(((((......)))))((....))((((...(((((((((((((...((((((.......)))((((((..((.(((((....))))).))...)))))))))...)))))))).).))))...(((((......))))).))))......))))).)))))).))))))))))))))))))))))))))))))))))))))))))))))...

Structure

---                                              a      c     ccaacggcggccgcggaggagcggcgaggaauc    -----------------cac    - -        aac   gccaggacgcggc      -ag  g     c 
   caaugggaccGUUCAGCCAUACAUCGAUCGAAGCagagacaacgua uacgag agugg                                 ggag                    ggag g cggcgcgg   cua             gcuugg   ag cuugc a
   |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||                                 ||||                    |||| | ||||||||   |||             ||||||   || |||||  
   guuacucuGGCAAGUCGGUAUGUAGCUAGUUUcguuucuguugcau augcuc ucacc                                 ccuc                    ucuu c gccgcgcu   gau             cgaacc   uc gaacg g
auc                                              c      a     ---------------------------auauua    auccaucaguuaguggaaga    a a        cga   -------------      aag  g     g 

Annotation confidence Not enough data

Genome context

4: 44574033-44574313 [+]

Mature bdi-miR7707-5p

• Accession: MIMAT0030131
• Description: Brachypodium distachyon bdi-miR7707-5p mature miRNA
• Sequence: 11 - GUUCAGCCAUACAUCGAUCGAAGC - 34
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7707-3p

• Accession: MIMAT0030132
• Description: Brachypodium distachyon bdi-miR7707-3p mature miRNA
• Sequence: 247 - UUUGAUCGAUGUAUGGCUGAACGG - 270
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443