Stem-loop bdi-MIR5185m

Accession

MI0025317

Description

Brachypodium distachyon bdi-MIR5185m precursor miRNA

Gene family

MIPF0001246; MIR5185

Literature search

1 open access papers mention bdi-MIR5185m
(1 sentences)

Sequence

cccgcgaaagucccgcUUCUAGUUCAUUUUUCGAAUCuucuauucaaaauuuuguucagaauuuaaauaagaUUUGAAAAUUGAACUAGAAGCgggacuuucguggg
((((((((((((((((((((((((((.(((((((((((..((((..(((((((....))))))).))))))))))))))).))))))))))))))))))))))))))

Structure

                          U           uc    ca       g 
cccgcgaaagucccgcUUCUAGUUCA UUUUCGAAUCu  uauu  aaauuuu u
|||||||||||||||||||||||||| |||||||||||  ||||  |||||||  
gggugcuuucagggCGAAGAUCAAGU AAAAGUUUaga  auaa  uuuaaga u
                          U           --    -a       c 

Annotation confidence Not enough data

Genome context

5: 23787287-23787393 [+]

Mature bdi-miR5185m-5p

• Accession: MIMAT0030129
• Description: Brachypodium distachyon bdi-miR5185m-5p mature miRNA
• Sequence: 17 - UUCUAGUUCAUUUUUCGAAUC - 37
• Evidence: experimental ; Illumina [1]

Mature bdi-miR5185m-3p

• Accession: MIMAT0030130
• Description: Brachypodium distachyon bdi-miR5185m-3p mature miRNA
• Sequence: 73 - UUUGAAAAUUGAACUAGAAGC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443