Stem-loop sequence bdi-MIR5185i

Accession

MI0025313 (change log)

Description

Brachypodium distachyon miR5185i stem-loop

Gene family

MIPF0001246; MIR5185

Literature search

1 open access papers mention bdi-MIR5185i
(1 sentences)

Stem-loop

   ----                    u            c        a   u 
5'     aaaguccugcuucuaguuca uuuucaaaucuu uauucaaa uuu g
       |||||||||||||||||||| |||||||||||| |||||||| ||| c
3'     uuucagggcgaagaucaagu aagaguuuagag auaaguuu aga u
   gcgc                    u            c        a   u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Bd21; GCA_000005505.1): 4: 35293520-35293620 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0025313

Mature sequence bdi-miR5185i-5p

• Accession: MIMAT0030121
• Sequence: 11 - uucuaguucauuuuucaaauc - 31
• Evidence: experimental; Illumina [1]

Mature sequence bdi-miR5185i-3p

• Accession: MIMAT0030122
• Sequence: 69 - uuugagaauugaacuagaagc - 89
• Evidence: experimental; Illumina [1]

References

1. PMID:23264558 "Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon" Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E Mol Plant. 6:423-443(2013).