Stem-loop bdi-MIR5185g

Accession

MI0025311

Description

Brachypodium distachyon bdi-MIR5185g precursor miRNA

Gene family

MIPF0001246; MIR5185

Literature search

1 open access papers mention bdi-MIR5185g
(1 sentences)

Sequence

ugcaaccgggauccgcgaaagucccgcUUCUAGUUCAUUUUUCAAAUCuucuauucaaaauuuuguucagaauuugaauaagagaUUUGAGAAUUGAACUAGAAGCgggauuuucgcgggau
............(((((((((((((((((((((((((.((((((((((((.((((((((.((((....)))))))))))).)))))))))))).)))))))))))))))))))))))))...

Structure

ugcaaccgggau                         U            c        a    g 
            ccgcgaaagucccgcUUCUAGUUCA UUUUCAAAUCuu uauucaaa uuuu u
            ||||||||||||||||||||||||| |||||||||||| |||||||| ||||  
            ggcgcuuuuagggCGAAGAUCAAGU AAGAGUUUagag auaaguuu aaga u
---------uag                         U            a        -    c 

Annotation confidence Not enough data

Genome context

4: 10669865-10669986 [+]

Mature bdi-miR5185g-5p

• Accession: MIMAT0030117
• Description: Brachypodium distachyon bdi-miR5185g-5p mature miRNA
• Sequence: 28 - UUCUAGUUCAUUUUUCAAAUC - 48
• Evidence: experimental ; Illumina [1]

Mature bdi-miR5185g-3p

• Accession: MIMAT0030118
• Description: Brachypodium distachyon bdi-miR5185g-3p mature miRNA
• Sequence: 86 - UUUGAGAAUUGAACUAGAAGC - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443