Stem-loop bdi-MIR5185c

Accession

MI0025307

Description

Brachypodium distachyon bdi-MIR5185c precursor miRNA

Gene family

MIPF0001246; MIR5185

Literature search

1 open access papers mention bdi-MIR5185c
(1 sentences)

Sequence

aucccgcgaaagucccgcUUCUAGUUCAUUUUUCAAAUCuuuuauucaaaauuuugcuuagaauuugaauaagagaUUUGAGAAUUGAACUAGAAGCaggacuuucgcag
.....((((((((((.((((((((((((.(((((((((((((((((((((.(((.....))).))))))))))))))))))))).)))))))))))).))))))))))..

Structure

auccc          c            U                     a   u 
     gcgaaagucc gcUUCUAGUUCA UUUUCAAAUCuuuuauucaaa uuu g
     |||||||||| |||||||||||| ||||||||||||||||||||| ||| c
     cgcuuucagg CGAAGAUCAAGU AAGAGUUUagagaauaaguuu aga u
---ga          a            U                     a   u 

Annotation confidence Not enough data

Genome context

1: 47573609-47573718 [+]

Mature bdi-miR5185c-5p

• Accession: MIMAT0030109
• Description: Brachypodium distachyon bdi-miR5185c-5p mature miRNA
• Sequence: 19 - UUCUAGUUCAUUUUUCAAAUC - 39
• Evidence: experimental ; Illumina [1]

Mature bdi-miR5185c-3p

• Accession: MIMAT0030110
• Description: Brachypodium distachyon bdi-miR5185c-3p mature miRNA
• Sequence: 77 - UUUGAGAAUUGAACUAGAAGC - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443