Stem-loop sequence bdi-MIR5174e

AccessionMI0025289 (change log)
DescriptionBrachypodium distachyon miR5174e stem-loop
Gene family MIPF0001200; MIR5067
Literature search

1 open access papers mention bdi-MIR5174e
(3 sentences)

Stem-loop 
   -------    u  auug                     a      c gc         g 
5'        uagc gc    uacucccucuguuccauaaag uuggca g  uuugaacua g
          |||| ||    ||||||||||||||||||||| |||||| |  |||||||||  
3'        aucg cg    augagggaggcaagguauuuc aaccgu c  aaacuugau g
   uuuuaaa    u  ----                     c      a ua         c
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Bd21; GCA_000005505.1) Overlapping transcripts
3: 37067795-37067905 [+]
intergenic
Database links

Mature sequence bdi-miR5174e-5p.2

Accession MIMAT0030067
Sequence

12 -  

uacucccucuguuccauaaag

 - 32

Get sequence
Evidence experimental; Illumina [1]

Mature sequence bdi-miR5174e-5p.1

Accession MIMAT0030068
Sequence

17 -  

ccucuguuccauaaagauugg

 - 37

Get sequence
Evidence experimental; Illumina [1]

Mature sequence bdi-miR5174e-3p.1

Accession MIMAT0030069
Sequence

73 -  

caaccuuuauggaacggaggg

 - 93

Get sequence
Evidence experimental; Illumina [1]

Mature sequence bdi-miR5174e-3p.2

Accession MIMAT0030070
Sequence

78 -  

uuuauggaacggagggaguag

 - 98

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:23264558 "Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon" Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E Mol Plant. 6:423-443(2013).