miRBase entry: oar-mir-22

Stem-loop oar-mir-22


Accession
MI0025268
Description
Ovis aries oar-mir-22 precursor miRNA
Gene family
MIPF0000053; mir-22

Literature search
5 open access papers mention oar-mir-22
(30 sentences)

Sequence

35292 reads, 6497 reads per million, 13 experiments
ggcugagccgcaguaguucuucaguggcaagcuuuauguccugacccagcuaAAGCUGCCAGUUGAAGAACUGuugcccucugcc
(((.(((..((((((((((((((((((((.((((((.((.........))))))))))))).))))))))))))))).))).)))

Structure
   u   cc               -     a      u  ccu 
ggc gag  gcaguaguucuucag uggca gcuuua gu   g
||| |||  ||||||||||||||| ||||| |||||| ||   a
ccg cuc  cguuGUCAAGAAGUU ACCGU CGAAau cg   c
   u   -c               G     -      -  acc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr11: 22392931-22393015 [-]

Database links

Mature oar-miR-22-3p

Accession MIMAT0030046
Description Ovis aries oar-miR-22-3p mature miRNA
Sequence 53 - AAGCUGCCAGUUGAAGAACUG - 73
Evidence experimental
cloned [1]

References

  1. PubMed ID: 23269700
    MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
    "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
    "Physiol Genomics (2013) 45:151-161