Stem-loop sequence oar-mir-200b

AccessionMI0025265 (change log)
DescriptionOvis aries miR-200b stem-loop
Gene family MIPF0000019; mir-8
Literature search

7 open access papers mention oar-mir-200b
(10 sentences)

   c    -    ug     c      u  ug 
5'  cauc uuac  ggcag auugga gg  u
    |||| ||||  ||||| |||||| ||  c
3'  guag aaug  ccguc uaaucu cu  u
   a    u    gu     a      -  gg 
Get sequence
Deep sequencing
16462 reads, 4.35e+03 reads per million, 13 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Oar_v4.0; GCA_000298735.2) Overlapping transcripts
chr12: 49327356-49327414 [-]
Clustered miRNAs
< 10kb from oar-mir-200b
oar-mir-200bchr12: 49327356-49327414 [-]
oar-mir-200achr12: 49326773-49326858 [-]
Database links

Mature sequence oar-miR-200b

Accession MIMAT0030043

38 - 


 - 58

Get sequence
Deep sequencing16194 reads, 13 experiments
Evidence experimental; cloned [1]


PMID:23269700 "MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200" Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E Physiol Genomics. 45:151-161(2013).