miRBase entry: oar-mir-10a

Stem-loop oar-mir-10a


Accession
MI0025251
Description
Ovis aries oar-mir-10a precursor miRNA
Gene family
MIPF0000033; mir-10

Literature search
4 open access papers mention oar-mir-10a
(19 sentences)

Sequence

21606 reads, 5494 reads per million, 13 experiments
gaucugucugucuucuguauaUACCCUGUAGAUCCGAAUUUGuguaaggaauuuugugaucacaaauucguaucuaggggaauauguaguugacauaaacacuccgcuc
....(((.((((..((((((((.((((.(((((.((((((((((................)))))))))).))))))))).))))))))..))))...)))........

Structure
----gauc   --c    uu        A    G     C          uaaggaa 
        ugu   uguc  cuguauaU CCCU UAGAU CGAAUUUGug       u
        |||   ||||  |||||||| |||| ||||| ||||||||||        
        aca   acag  gauguaua gggg aucua gcuuaaacac       u
cucgccuc   aau    uu        a    -     u          uaguguu 


Annotation confidence Not enough data
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Genome context
chr11: 37411553-37411661 [+]

Database links

Mature oar-miR-10a

Accession MIMAT0030030
Description Ovis aries oar-miR-10a mature miRNA
Sequence 22 - UACCCUGUAGAUCCGAAUUUG - 42
Evidence experimental
cloned [1]

References

  1. PubMed ID: 23269700
    MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
    "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
    "Physiol Genomics (2013) 45:151-161