miRBase entry: bta-mir-2285x

Stem-loop bta-mir-2285x


Accession
MI0025190
Description
Bos taurus bta-mir-2285x precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285x
(15 sentences)

Sequence

49 reads, 9 reads per million, 26 experiments
uauauuggguuggccaaaaaguuuguucaggguuuuucuaagauguuacgGAAAAAUCUGAAUGAACUUUUGGccaaccuaauaua
(((((((((((((((((((.(((((((((((.(((((((((....))).)))))).))))))))))))))))))))))))))))))

Structure
                   a           g      -   g 
uauauuggguuggccaaaa guuuguucagg uuuuuc uaa a
||||||||||||||||||| ||||||||||| |||||| |||  
auauaauccaaccGGUUUU CAAGUAAGUCU AAAAGg auu u
                   -           A      c   g 


Annotation confidence Not enough data
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Genome context
chr16: 61232048-61232133 [+]

Database links

Mature bta-miR-2285x

Accession MIMAT0029946
Description Bos taurus bta-miR-2285x mature miRNA
Sequence 51 - GAAAAAUCUGAAUGAACUUUUGG - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23100578
    Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
    "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
    "J Anim Sci (2013) 91:90-103