Stem-loop lva-mir-2011

Accession

MI0025178

Description

Lytechinus variegatus lva-mir-2011 precursor miRNA

Gene family

MIPF0000739; mir-2011

Sequence

caccaugccuagucucgcugcagucacuaccacaccuucgguggcuuguuacagcuucACCAAGGUGUGCUAGUGAUGACagggagauagguacaauca
.....((((((.((((.(((..(((((((.((((((((.(((((((......)))..)))))))))))).)))))))..))).))))))))))......

Structure

-cacca      g    g   ca       c        c    --   ug 
      ugccua ucuc cug  gucacua cacaccuu ggug  gcu  u
      |||||| |||| |||  ||||||| |||||||| ||||  |||   
      auggau agag gaC  UAGUGAU GUGUGGAA CCAc  cga  u
acuaac      -    g   AG       C        -    uu   ca 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-2011-3p

• Accession: MIMAT0032232
• Description: Lytechinus variegatus lva-miR-2011-3p mature miRNA
• Sequence: 59 - ACCAAGGUGUGCUAGUGAUGAC - 80
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374