miRBase entry: lva-mir-2007

Stem-loop lva-mir-2007


Accession
MI0025174
Description
Lytechinus variegatus lva-mir-2007 precursor miRNA
Gene family
MIPF0002094; mir-2007


Sequence

gcaucaugcauUAUUUCAGGCAGUAUACUGGUAAaggguuuuugcaccauucuuaccaguugccaccugaaauuaauguaagaugug
(((((.((((((((((((((..(((.((((((((..(((......)))....)))))))))))..))))))).))))))).))))).

Structure
-     a       -       CA   U        --ag   uu 
 gcauc ugcauUA UUUCAGG  GUA ACUGGUAA    ggu  u
 ||||| ||||||| |||||||  ||| ||||||||    |||   
 uguag auguaau aaagucc  cgu ugaccauu    cca  u
g     a       u       ac   -        cuua   cg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lva-miR-2007-5p

Accession MIMAT0032228
Description Lytechinus variegatus lva-miR-2007-5p mature miRNA
Sequence 12 - UAUUUCAGGCAGUAUACUGGUAA - 34
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374