Stem-loop lva-mir-2006

Accession

MI0025173

Description

Lytechinus variegatus lva-mir-2006 precursor miRNA

Gene family

MIPF0001936; mir-2006

Sequence

gcuguagcaugugccaucgccaccaaguguacuucaguggacauuuugucagcaugaaaucuGAGCACACUUGGUAGCGGUGCCgugagcuacuc
...(((((.((((.((((((.(((((((((.(((((((.((((...)))).)).)))......)).))))))))).)))))).)))).)))))..

Structure

gcu     a    c      c         a  ------   -  g    u 
   guagc ugug caucgc accaagugu cu      uca gu gaca  
   ||||| |||| |||||| ||||||||| ||      ||| || |||| u
   caucg gugC GUGGCG UGGUUCACA GA      agu cg cugu  
-cu     a    C      A         C  Gucuaa   a  a    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-2006-3p

• Accession: MIMAT0032227
• Description: Lytechinus variegatus lva-miR-2006-3p mature miRNA
• Sequence: 63 - GAGCACACUUGGUAGCGGUGCC - 84
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374