Stem-loop lva-mir-2004

Accession

MI0025171

Description

Lytechinus variegatus lva-mir-2004 precursor miRNA

Gene family

MIPF0002042; mir-2004

Sequence

agaggcuacuugcggaccuuucuguggcugucguguuaagugugauucuaugaagacacuUCACACACAACCACAGGAAGUUuugcaugguagccaug
...(((((((((((((.((((((((((.(((.((((.((((((..(((...))).)))))).))))))).)))))))))).)))))).)))))))...

Structure

aga       -      c          c   c    u      ga   u 
   ggcuacu ugcgga cuuucugugg ugu gugu aagugu  uuc  
   ||||||| |||||| |||||||||| ||| |||| ||||||  ||| a
   ccgaugg acguuU GAAGGACACC ACA CACA Uucaca  aag  
gua       u      U          A   -    C      -g   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-2004-3p

• Accession: MIMAT0032225
• Description: Lytechinus variegatus lva-miR-2004-3p mature miRNA
• Sequence: 61 - UCACACACAACCACAGGAAGUU - 82
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374