miRBase entry: lva-mir-242

Stem-loop lva-mir-242


Accession
MI0025162
Description
Lytechinus variegatus lva-mir-242 precursor miRNA
Gene family
MIPF0000731; mir-242_2


Sequence

guaaaaccaugucgggggUUGCGUAGGCGUUGUGCACAGUguuccuucaccuuacaauugugcaucucauccacgcaaaucacggcacuggucacaaa
.....(((((((((.((.((((((.((.(..(((((((((((...........)).)))))))))..).)).)))))).)).))))).))))......

Structure
-guaaa    -     g  g      A  C UU         -  uccu 
      acca ugucg gg UUGCGU GG G  GUGCACAGU gu    u
      |||| ||||| || |||||| || |  ||||||||| ||    c
      uggu acggc cu aacgca cu c  uacguguua ca    a
aaacac    c     a  a      c  a uc         a  uucc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lva-miR-242-5p

Accession MIMAT0032216
Description Lytechinus variegatus lva-miR-242-5p mature miRNA
Sequence 19 - UUGCGUAGGCGUUGUGCACAGU - 40
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374