Stem-loop lva-mir-193

Accession

MI0025158

Description

Lytechinus variegatus lva-mir-193 precursor miRNA

Sequence

gucguuugaacuuccgggguuguauuggcuaaugugugcaaccccucuuucagcccccauggggguuugacugaugggcuguaacuguguucaUACUGGCCAGCACAAUCCCAGAaguagaacagacgaa
.(((((((.(((((.((((((((.(((((((.((((((((.(((.((..((((((((....)))).))))..)).))).))))........)))).))))))).)))))))).)))))....))))))).

Structure

g       ---a     c        a       a    --------    a   c  uu    -    c 
 ucguuug    acuuc gggguugu uuggcua ugug        ugca ccc uc  ucag cccc a
 |||||||    ||||| |||||||| ||||||| ||||        |||| ||| ||  |||| ||||  
 agcagac    ugaAG CCCUAACA GACCGGU AUac        augu ggg ag  aguu gggg u
a       aaga     A        C       C    uuguguca    c   u  uc    u    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-193-3p

• Accession: MIMAT0032212
• Description: Lytechinus variegatus lva-miR-193-3p mature miRNA
• Sequence: 94 - UACUGGCCAGCACAAUCCCAGA - 115
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374