Stem-loop lva-mir-71

Accession

MI0025145

Description

Lytechinus variegatus lva-mir-71 precursor miRNA

Gene family

MIPF0000278; mir-71

Sequence

acaggaucgguguuccccgggUGAAAGACAUGGGUAGUGAGAUUugaauuucacaaaacaaucucacuauucuguuuuuccccuggcgaauacuuauuaca
....(((.(((((((.(((((.((((((((.(((((((((((((...............))))))))))))))))))))).))))).))))))).)))...

Structure

acag   c       c     U        U             ugaauu 
    gau gguguuc ccggg GAAAGACA GGGUAGUGAGAUU      u
    ||| ||||||| ||||| |||||||| |||||||||||||      c
    uua ucauaag ggucc cuuuuugu cuuaucacucuaa      a
-aca   u       c     c        -             caaaac 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-71-5p

• Accession: MIMAT0032200
• Description: Lytechinus variegatus lva-miR-71-5p mature miRNA
• Sequence: 22 - UGAAAGACAUGGGUAGUGAGAUU - 44
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374