Stem-loop lva-mir-10

Accession

MI0025138

Description

Lytechinus variegatus lva-mir-10 precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

uucuugggcuuacaucAACCCUGUAGAUCCGAAUUUGUGuccgaguuucucgccucuggaagucacagauucgggucucuggguaacuguaucccagg
..((((((..((((...((((.(.(((((((((((((((((((((........))).)))...)))))))))))))))).))))...)))).))))))

Structure

uu      cu    ucA    U U               ---   -   uuu 
  cuuggg  uaca   ACCC G AGAUCCGAAUUUGUG   ucc gag   c
  ||||||  ||||   |||| | |||||||||||||||   ||| |||    
  ggaccc  augu   uggg c ucugggcuuagacac   agg cuc   u
--      -u    caa    u -               uga   u   cgc 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-10-5p

• Accession: MIMAT0032193
• Description: Lytechinus variegatus lva-miR-10-5p mature miRNA
• Sequence: 17 - AACCCUGUAGAUCCGAAUUUGUG - 39
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374