Stem-loop lva-mir-7

Accession

MI0025136

Description

Lytechinus variegatus lva-mir-7 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

ucuggcccuaUGGAAGACUAGUGAUUUUGUUGUugugaaaugucaaagaacuaacaaaaaaucacugucggccacuggggacaggggugca
((((.((((((((..(((.(((((((((.(((((((.............)).)))))))))))))))))..))).))))).))))......

Structure

------    g     -   AA   U         G     -  gaaau 
      ucug cccua UGG  GAC AGUGAUUUU UUGUu gu     g
      |||| ||||| |||  ||| ||||||||| ||||| ||     u
      ggac ggggu acc  cug ucacuaaaa aacaa ca     c
acgugg    a     c   gg   -         -     u  agaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-7-5p

• Accession: MIMAT0032191
• Description: Lytechinus variegatus lva-miR-7-5p mature miRNA
• Sequence: 11 - UGGAAGACUAGUGAUUUUGUUGU - 33
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374