Stem-loop lva-mir-1

Accession

MI0025135

Description

Lytechinus variegatus lva-mir-1 precursor miRNA

Gene family

MIPF0000038; mir-1

Sequence

cauaucccaugccauaacauacuucuuuagaauuccauacugaaucuccgcaacucuaUGGAAUGUAAAGAAGUAUGUAUugaaacugggaccuc
....(((((...((..(((((((((((((..((((((((..(...........)..)))))))).)))))))))))))..))....)))))....

Structure

caua     -ugc  ua             ga        cu aauc 
    uccca    ca  acauacuucuuua  auuccaua  g    u
    |||||    ||  |||||||||||||  ||||||||  |    c
    agggu    gu  UGUAUGAAGAAAU  UAAGGUau  c    c
cucc     caaa  UA             -G        cu aacg 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-1-3p

• Accession: MIMAT0032190
• Description: Lytechinus variegatus lva-miR-1-3p mature miRNA
• Sequence: 59 - UGGAAUGUAAAGAAGUAUGUAU - 80
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374