miRBase entry: lva-let-7

Stem-loop lva-let-7


Accession
MI0025134
Description
Lytechinus variegatus lva-let-7 precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

ugaaugguccuuacgUGAGGUAGUAGGUUAUAUAGUUuuggagauacacucaauggcgauagcuauacagccugcuagcuuuccuugggccauucac
((((((((((......(((.(((((((((.(((((((((((((.....))).....))).))))))).))))))))).))).....)))))))))).

Structure
-          uuacgU   G         A       -   -----   a 
 ugaauggucc      GAG UAGUAGGUU UAUAGUU uug     gag u
 ||||||||||      ||| ||||||||| ||||||| |||     ||| a
 acuuaccggg      uuc aucguccga auaucga agc     cuc c
c          -uuccu   g         c       u   gguaa   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lva-let-7-5p

Accession MIMAT0032189
Description Lytechinus variegatus lva-let-7-5p mature miRNA
Sequence 16 - UGAGGUAGUAGGUUAUAUAGUU - 37
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374