miRBase entry: pmi-mir-2002

Stem-loop pmi-mir-2002


Accession
MI0025123
Description
Patiria miniata pmi-mir-2002 precursor miRNA


Sequence

gagagacugccaacuguccagagggccaacagaguguucccaugugaauaaaucaaugUGAAUACAUCUGCUGGUUCCAUuagacaguauggcac
.......(((((((((((.((.((((((.((((((((((.(((.(((.....)))))).)))))).)))).))).))).)).)))))).))))).

Structure
gagagac     -      c  a   -   a    -      c   g   a 
       ugcca acuguc ag ggg cca caga guguuc cau uga u
       ||||| |||||| || ||| ||| |||| |||||| ||| ||| a
       acggu ugacag uU CCU GGU GUCU CAUAAG gua acu a
------c     a      a  A   U   C    A      U   -   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pmi-miR-2002-3p

Accession MIMAT0032176
Description Patiria miniata pmi-miR-2002-3p mature miRNA
Sequence 59 - UGAAUACAUCUGCUGGUUCCAU - 80
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374