Stem-loop pmi-mir-242

Accession

MI0025116

Description

Patiria miniata pmi-mir-242 precursor miRNA

Gene family

MIPF0000731; mir-242_2

Sequence

auucucacuguaaggugUUGCGUAGGCGUUGUGCACAGUguugguuuuugaacgggacugugcaucucacccgcgcaaagcauugcagagaccuc
....((.((((((.((.((((((.((.(..(((((((((.(((.........))).)))))))))..).)).)))))).)).)))))).))....

Structure

auuc  a      g  g      A  C UU         g   guu 
    uc cuguaa gu UUGCGU GG G  GUGCACAGU uug   u
    || |||||| || |||||| || |  ||||||||| |||   u
    ag gacguu cg aacgcg cc c  uacguguca ggc   u
cucc  a      a  a      c  a uc         g   aag 

Annotation confidence Not enough data

Genome context

Unknown

Mature pmi-miR-242-5p

• Accession: MIMAT0032169
• Description: Patiria miniata pmi-miR-242-5p mature miRNA
• Sequence: 18 - UUGCGUAGGCGUUGUGCACAGU - 39
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374