Stem-loop cbn-mir-35c-2

Accession

MI0025071

Description

Caenorhabditis brenneri cbn-mir-35c-2 precursor miRNA

Gene family

MIPF0000096; mir-36

Sequence

ugcugauuuuugccgcugugauauuucuaagccaugauuaUCACCGGGCGAAAAUUUGGCACA
((((((((((((((.(.((((((..((........)).)))))).))))))))).))))))..

Structure

--      -        g u      uu  uaa 
  ugcuga uuuuugcc c gugaua  uc   g
  |||||| |||||||| | ||||||  ||    
  ACGGUU AAAAGCGG G CACUau  ag   c
AC      U        - C      -u  uac 

Annotation confidence Not enough data

Genome context

Cbre_Contig34: 784144-784206 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from cbn-mir-35c-2

Mature cbn-miR-35c

• Accession: MIMAT0029930
• Description: Caenorhabditis brenneri cbn-miR-35c mature miRNA
• Sequence: 41 - UCACCGGGCGAAAAUUUGGCACA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508