miRBase entry: cbn-mir-35i

Stem-loop cbn-mir-35i


Accession
MI0025068
Description
Caenorhabditis brenneri cbn-mir-35i precursor miRNA
Gene family
MIPF0000096; mir-36


Sequence

ugcugguuucuaccgcggugauauuucugaguuguaacuaUCACCGGGUAAAAAUUUGGCAC
(((((((((.((((.((((((((.(((......).)).)))))))))))).))).)))))).

Structure
-      -   c    g        u  - ug 
 ugcugg uuu uacc cggugaua uu c  a
 |||||| ||| |||| |||||||| || |   
 ACGGUU AAA AUGG GCCACUau aa g  g
C      U   A    -        c  u uu 


Annotation confidence Not enough data
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Genome context
Cbre_Contig34: 783546-783607 [-]
Clustered miRNAs
19 other miRNAs are < 10 kb from cbn-mir-35i
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbn-miR-35i

Accession MIMAT0029936
Description Caenorhabditis brenneri cbn-miR-35i mature miRNA
Sequence 41 - UCACCGGGUAAAAAUUUGGCAC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508