Stem-loop cbn-mir-35g

Accession

MI0025066

Description

Caenorhabditis brenneri cbn-mir-35g precursor miRNA

Gene family

MIPF0000096; mir-36

Sequence

agcugguuucuccucuggugauaaauccagcagugcuuaUCACCGGGAGUAAAUCUGCUCG
(((.((((((((((..((((((((...((....)).))))))))))))).))))).)))..

Structure

--   u     -     cu        auc  g 
  agc gguuu cuccu  ggugauaa   ca c
  ||| ||||| |||||  ||||||||   ||  
  UCG CUAAA GAGGG  CCACUauu   gu a
GC   U     U     --        --c  g 

Annotation confidence Not enough data

Genome context

Cbre_Contig34: 782645-782705 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from cbn-mir-35g

Mature cbn-miR-35g

• Accession: MIMAT0029934
• Description: Caenorhabditis brenneri cbn-miR-35g mature miRNA
• Sequence: 40 - UCACCGGGAGUAAAUCUGCUCG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508