Stem-loop cbn-mir-35f-1

Accession

MI0025065

Description

Caenorhabditis brenneri cbn-mir-35f-1 precursor miRNA

Gene family

MIPF0000096; mir-36

Sequence

ugcugguuuuugccgcggugauacuucaacgugaugauuaUCACCGGGUGAAAAUACGGCACA
((((((((((((((.((((((((..(((......))).))))))))))))))))).)))))..

Structure

--     -         g        cu   ac 
  ugcug guuuuugcc cggugaua  uca  g
  ||||| ||||||||| ||||||||  |||   
  ACGGC UAAAAGUGG GCCACUau  agu  u
AC     A         -        -u   ag 

Annotation confidence Not enough data

Genome context

Cbre_Contig34: 781862-781924 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from cbn-mir-35f-1

Mature cbn-miR-35f

• Accession: MIMAT0029933
• Description: Caenorhabditis brenneri cbn-miR-35f mature miRNA
• Sequence: 41 - UCACCGGGUGAAAAUACGGCACA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508