Stem-loop cbn-mir-35e

Accession

MI0025064

Description

Caenorhabditis brenneri cbn-mir-35e precursor miRNA

Gene family

MIPF0001648; mir-35_2

Sequence

agcugauuucacuuucggugauauguccaugaugcgccuaUCACCGGGUGUAAAUUGGCUCG
(((((((((((((..((((((((.((.((...)).)).)))))))))))).)))))))))..

Structure

--         -    uu        u  c  u 
  agcugauuu cacu  cggugaua gu ca  
  ||||||||| ||||  |||||||| || || g
  UCGGUUAAA GUGG  GCCACUau cg gu  
GC         U    --        c  c  a 

Annotation confidence Not enough data

Genome context

Cbre_Contig34: 781487-781548 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from cbn-mir-35e

Mature cbn-miR-35e

• Accession: MIMAT0029932
• Description: Caenorhabditis brenneri cbn-miR-35e mature miRNA
• Sequence: 41 - UCACCGGGUGUAAAUUGGCUCG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508