Stem-loop cbn-mir-35b-1

Accession

MI0025061

Description

Caenorhabditis brenneri cbn-mir-35b-1 precursor miRNA

Gene family

MIPF0001648; mir-35_2

Sequence

agccgauuucucuacuggugauaauuccaucgagugucuaUCACCGGGAGUAAAUCUGCUCU
(((.((((((((..(((((((((((((....))))...)))))))))))).))))).)))..

Structure

--   c     -   ua         ---    c 
  agc gauuu cuc  cuggugaua   auuc a
  ||| ||||| |||  |||||||||   ||||  
  UCG CUAAA GAG  GGCCACUau   ugag u
UC   U     U   --         cug    c 

Annotation confidence Not enough data

Genome context

Cbre_Contig34: 779387-779448 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from cbn-mir-35b-1

Mature cbn-miR-35b

• Accession: MIMAT0029929
• Description: Caenorhabditis brenneri cbn-miR-35b mature miRNA
• Sequence: 41 - UCACCGGGAGUAAAUCUGCUCU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508