miRBase entry: cbn-mir-36-1

Stem-loop cbn-mir-36-1


Accession
MI0025059
Description
Caenorhabditis brenneri cbn-mir-36-1 precursor miRNA
Gene family
MIPF0001664; mir-36_2


Sequence

agcuaguucuuaccgcggugcuacaacaagcauaacaucuaACACCGGGUAAAAACUAGCUCG
((((((((.(((((.(((((......................)))))))))).))))))))..

Structure
--        c     g     cuacaacaag 
  agcuaguu uuacc cggug          c
  |||||||| ||||| |||||           
  UCGAUCAA AAUGG GCCAC          a
GC        A     -     Aaucuacaau 


Annotation confidence Not enough data
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Genome context
Cbre_Contig28: 208510-208572 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from cbn-mir-36-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbn-miR-36

Accession MIMAT0029927
Description Caenorhabditis brenneri cbn-miR-36 mature miRNA
Sequence 42 - ACACCGGGUAAAAACUAGCUCG - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508