Stem-loop cbr-mir-35g-2

Accession

MI0025050

Description

Caenorhabditis briggsae cbr-mir-35g-2 precursor miRNA

Gene family

MIPF0000096; mir-36

Sequence

agccaauuuuuuccguggugauauuccgaaacaagugguuaUCACCGGGUAAAAACUGGUAGA
.((((.(((((.((.((((((((..(((.......))).)))))))))).))))).))))...

Structure

--a    a     u  g        uu   aa 
   gcca uuuuu cc uggugaua  ccg  a
   |||| ||||| || ||||||||  |||  c
   UGGU AAAAA GG GCCACUau  ggu  a
AGA    C     U  -        -u   ga 

Annotation confidence Not enough data

Genome context

chrX: 15374624-15374686 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from cbr-mir-35g-2

Mature cbr-miR-35g

• Accession: MIMAT0029919
• Description: Caenorhabditis briggsae cbr-miR-35g mature miRNA
• Sequence: 42 - UCACCGGGUAAAAACUGGUAGA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508