Stem-loop cbr-mir-35f

Accession

MI0025048

Description

Caenorhabditis briggsae cbr-mir-35f precursor miRNA

Gene family

MIPF0000096; mir-36

Sequence

cgcugguuucugccgcagugauauuccaacguaguggcuaUCACCGGGUGAGAACUGGUAGA
.((((((((.((((.(.((((((..(((......))).)))))).))))).))))))))...

Structure

--c        c    g a      uu   ac 
   gcugguuu ugcc c gugaua  cca  g
   |||||||| |||| | ||||||  |||   
   UGGUCAAG GUGG G CACUau  ggu  u
AGA        A    - C      -c   ga 

Annotation confidence Not enough data

Genome context

chrX: 15371011-15371072 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from cbr-mir-35f

Mature cbr-miR-35f

• Accession: MIMAT0029918
• Description: Caenorhabditis briggsae cbr-miR-35f mature miRNA
• Sequence: 41 - UCACCGGGUGAGAACUGGUAGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508