Stem-loop sequence mmu-mir-3620

AccessionMI0025027 (change log)
Symbol MGI:Mir3620
DescriptionMus musculus miR-3620 stem-loop
Stem-loop 
   --cu      u        a  -ca   uuc 
5'     gugggc gggcuggg ag   gcu   a
       |||||| |||||||| ||   |||    
3'     cacccg cccgacuc uc   cga   u
   accc      c        g  cuc   ccc
Get sequence
Deep sequencing
120 reads, 158 reads per million, 24 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chrX: 150547385-150547445 [-]
sense
OTTMUST00000045905 ; Apex2-003; intron 5
OTTMUST00000045904 ; Apex2-002; intron 6
ENSMUST00000112727 ; Apex2-003; intron 5
ENSMUST00000112725 ; Apex2-002; intron 6
antisense
OTTMUST00000045893 ; Alas2-001; 3'UTR (exon 1)
ENSMUST00000066337 ; Alas2-001; 3'UTR (exon 1)
Database links

Mature sequence mmu-miR-3620-5p

Accession MIMAT0029878
Sequence

1 -  

cugugggcugggcugggaagca

 - 22

Get sequence
Deep sequencing115 reads, 24 experiments
Evidence experimental; RNAseq [1]
Predicted targets

Mature sequence mmu-miR-3620-3p

Accession MIMAT0029879
Sequence

40 -  

cugcucagccccgcccacccca

 - 61

Get sequence
Deep sequencing5 reads, 4 experiments
Evidence experimental; RNAseq [1]
Predicted targets

References

1
PMID:23325850 "Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues" Castellano L, Stebbing J Nucleic Acids Res. 41:3339-3351(2013).