Stem-loop sequence tgu-mir-7644

Accession

MI0024981 (change log)

Description

Taeniopygia guttata miR-7644 stem-loop

Literature search

1 open access papers mention tgu-mir-7644
(1 sentences)

Stem-loop

   ucaauuucuagauuaaguggcuaugcuugugggauagagaaaaac       gg  -  a         uuga 
5'                                              uugccau  uc ug aggaaaagg    u
                                                |||||||  || || |||||||||     
3'                                              gacggua  ag au uccuuuuuc    u
   ----------------------------------auuuccaacaa       aa  u  a         uaug 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (taeGlu3.2.4): chr3: 57588392-57588504 [-]
• Overlapping transcripts:

  sense

  ENSTGUT00000011889 ; intron 1

  ENSTGUT00000018452 ; SNORA29-201; exon 1

Database links

• miRBase Tracker:MI0024981

Mature sequence tgu-miR-7644-5p

• Accession: MIMAT0029788
• Sequence: 46 - uugccauggucugaaggaaaagg - 68
• Evidence: experimental; Illumina [1]

Mature sequence tgu-miR-7644-3p

• Accession: MIMAT0029789
• Sequence: 81 - uuuuccuauaugaaaauggcaga - 103
• Evidence: experimental; Illumina [1]

References

1. PMID:23268654 "Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression" Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X BMC Genomics. 13:727(2012).