miRBase entry: cbn-mir-85

Stem-loop cbn-mir-85


Accession
MI0024972
Description
Caenorhabditis brenneri cbn-mir-85 precursor miRNA
Gene family
MIPF0000249; mir-85


Sequence

ccgacuuuucaauauuuugaaaccaguuauucugagaaugguUACAAAGUAUUUGAAAAGCCGUGC
.((.(((((((((((((((.(((((.............))))).))))))).)))))))).))...

Structure
--c  a        -       a     guuau 
   cg cuuuucaa uauuuug aacca     u
   || |||||||| ||||||| |||||     c
   GC GAAAAGUU AUGAAAC Uuggu     u
CGU  C        U       A     aagag 


Annotation confidence Not enough data
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Genome context
Cbre_Contig90: 27640-27705 [+]

Database links

Mature cbn-miR-85

Accession MIMAT0029780
Description Caenorhabditis brenneri cbn-miR-85 mature miRNA
Sequence 43 - UACAAAGUAUUUGAAAAGCCGUGC - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508