Stem-loop cbn-mir-248

Accession

MI0024953

Description

Caenorhabditis brenneri cbn-mir-248 precursor miRNA

Sequence

agcgcuauccagccguuguaaucaagaacggagguugaCUACACGUGCACGGAUAACGCUCA
((((.(((((.(((((.(((.((((.........)))).)))))).))..))))).))))..

Structure

--    c     -a  -   u   a    gaa 
  agcg uaucc  gc cgu gua ucaa   c
  |||| |||||  || ||| ||| ||||   g
  UCGC AUAGG  CG GCA CAU aguu   g
AC    A     CA  U   -   C    gga 

Annotation confidence Not enough data

Genome context

Cbre_Contig0: 1122568-1122629 [+]

Mature cbn-miR-248

• Accession: MIMAT0029765
• Description: Caenorhabditis brenneri cbn-miR-248 mature miRNA
• Sequence: 39 - CUACACGUGCACGGAUAACGCUCA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508