miRBase entry: cbn-mir-7640-1

Stem-loop cbn-mir-7640-1


Accession
MI0024949
Description
Caenorhabditis brenneri cbn-mir-7640-1 precursor miRNA
Gene family
MIPF0001783; mir-7640


Sequence

ugaacauccuggugaccaaacacaguugauucgggaugUUUGGUCGUCGAGACGUUCAAA
(((((.((.((((((((((((((.(......)..).))))))))))))).)).)))))..

Structure
--     a  c             - -a uu 
  ugaac uc uggugaccaaaca c  g  g
  ||||| || ||||||||||||| |  |   
  ACUUG AG GCUGCUGGUUUgu g  c  a
AA     C  A             a gg uu 


Annotation confidence Not enough data
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Genome context
Cbre_Contig179: 139214-139273 [+]

Database links

Mature cbn-miR-7640

Accession MIMAT0029763
Description Caenorhabditis brenneri cbn-miR-7640 mature miRNA
Sequence 39 - UUUGGUCGUCGAGACGUUCAAA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508