miRBase entry: cbn-mir-245-1

Stem-loop cbn-mir-245-1


Accession
MI0024947
Description
Caenorhabditis brenneri cbn-mir-245-1 precursor miRNA
Gene family
MIPF0000257; mir-245


Sequence

gcugcuugcaagguaccuaauuguuugaaauucauucucaAUUGGUCCCCUCCAAGUAGCUC
((((((((...((.(((.(((((..(((...)))....)))))))).))...))))))))..

Structure
--        caa  u   u     --uu   a 
  gcugcuug   gg acc aauug    uga  
  ||||||||   || ||| |||||    ||| a
  CGAUGAAC   CC UGG UUAac    acu  
CU        CUC  C   -     ucuu   u 


Annotation confidence Not enough data
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Genome context
Cbre_Contig480: 40056-40117 [+]

Database links

Mature cbn-miR-245

Accession MIMAT0029762
Description Caenorhabditis brenneri cbn-miR-245 mature miRNA
Sequence 41 - AUUGGUCCCCUCCAAGUAGCUC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508