miRBase entry: cbn-mir-236-1

Stem-loop cbn-mir-236-1

Accession

MI0024943

Description

Caenorhabditis brenneri cbn-mir-236-1 precursor miRNA

Gene family

MIPF0000232; mir-236

Sequence

gucuuaccuguucaauauuuagacuaacacaucaagagaucUAAUACUGUCAGGUAAUGACGCU
((((((((((..((.((((.(((((...........)).))))))).)).))))))).)))...

Structure

---   -       uu  a    u   -  aaca 
   guc uuaccug  ca uauu aga cu    c
   ||| |||||||  || |||| ||| ||    a
   CAG AAUGGAC  GU AUAA Ucu ga    u
UCG   U       -U  C    -   a  gaac

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

Cbre_Contig66: 88009-88072 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-236-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-236

Accession	MIMAT0029759
Description	Caenorhabditis brenneri cbn-miR-236 mature miRNA
Sequence	42 - UAAUACUGUCAGGUAAUGACGCU - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508