Stem-loop cbn-mir-49

Accession

MI0024923

Description

Caenorhabditis brenneri cbn-mir-49 precursor miRNA

Gene family

MIPF0000237; mir-49

Sequence

cgcgguuuuuuuguguagugcuccgcaccaucgaguguucgAAGCACCACGAGAAGCUGCAGA
.((((((((((.(((..(((((.(((((......)))..)).))))))))))))))))))...

Structure

--c          u   ua     c  --   ca 
   gcgguuuuuu gug  gugcu cg  cac  u
   |||||||||| |||  ||||| ||  |||   
   CGUCGAAGAG CAC  CACGA gc  gug  c
AGA          -   --     A  uu   ag 

Annotation confidence Not enough data

Genome context

Cbre_Contig9: 1284686-1284748 [-]

Mature cbn-miR-49

• Accession: MIMAT0029745
• Description: Caenorhabditis brenneri cbn-miR-49 mature miRNA
• Sequence: 42 - AAGCACCACGAGAAGCUGCAGA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508