Stem-loop cbn-mir-46

Accession

MI0024921

Description

Caenorhabditis brenneri cbn-mir-46 precursor miRNA

Gene family

MIPF0000087; mir-46

Sequence

aagagagccgucuauugacaguucgucucuguucagucagguacUGUCAUGGAGUCGCUCUCUUCA
((((((((..(((((.((((((.....((((......)))).)))))))))))...))))))))..

Structure

--        -cg     u      ucguc    uu 
  aagagagc   ucuau gacagu     ucug  c
  ||||||||   ||||| ||||||     ||||   
  UUCUCUCG   AGGUA CUGUca     ggac  a
AC        CUG     -      ----u    ug 

Annotation confidence Not enough data

Genome context

Cbre_Contig13: 883775-883840 [-]

Mature cbn-miR-46

• Accession: MIMAT0029743
• Description: Caenorhabditis brenneri cbn-miR-46 mature miRNA
• Sequence: 45 - UGUCAUGGAGUCGCUCUCUUCA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508