Stem-loop cbn-mir-1824a-2

Accession

MI0024911

Description

Caenorhabditis brenneri cbn-mir-1824a-2 precursor miRNA

Gene family

MIPF0001717; mir-1824

Sequence

ucacugguuucuucauugccacaucaaaucagaaagaguugUGGCAGUGCCGAUUCUAGUGGC
.((((((..((..((((((((((.....((.....))..))))))))))..))..))))))..

Structure

-u      uu  uu          ucaaa  a 
  cacugg  uc  cauugccaca     uc g
  ||||||  ||  ||||||||||     || a
  GUGAUC  AG  GUGACGGUgu     ag a
CG      UU  CC          ---ug  a 

Annotation confidence Not enough data

Genome context

Cbre_Contig955: 18000-18062 [+]

Mature cbn-miR-1824a

• Accession: MIMAT0029736
• Description: Caenorhabditis brenneri cbn-miR-1824a mature miRNA
• Sequence: 42 - UGGCAGUGCCGAUUCUAGUGGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508