Stem-loop cbn-mir-1824a-1

Accession

MI0024910

Description

Caenorhabditis brenneri cbn-mir-1824a-1 precursor miRNA

Gene family

MIPF0001717; mir-1824

Sequence

ucacugguuucuucauugccacaucaaaucagaaaggguugUGGCAGUGCCGAUUCUAGUGGC
.((((((..((..((((((((((....(((......)))))))))))))..))..))))))..

Structure

-u      uu  uu          ucaa   ag 
  cacugg  uc  cauugccaca    auc  a
  ||||||  ||  ||||||||||    |||   
  GUGAUC  AG  GUGACGGUgu    ugg  a
CG      UU  CC          ----   ga 

Annotation confidence Not enough data

Genome context

Cbre_Contig181: 214509-214571 [-]

Mature cbn-miR-1824a

• Accession: MIMAT0029736
• Description: Caenorhabditis brenneri cbn-miR-1824a mature miRNA
• Sequence: 42 - UGGCAGUGCCGAUUCUAGUGGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508