miRBase entry: cbn-lin-4-1

Stem-loop cbn-lin-4-1


Accession
MI0024907
Description
Caenorhabditis brenneri cbn-lin-4-1 precursor miRNA
Gene family
MIPF0000303; lin-4


Sequence

UCCCUGAGACCUCAAGUGUGAgcguacuguagaugcuucacaccugggcucucuggguacc
.(((.((((.((((.((((((((((.......)))).)))))).)))).)))).)))....

Structure
---U   U    C    A      -    ac 
    CCC GAGA CUCA GUGUGA gcgu  u
    ||| |||| |||| |||||| ||||  g
    ggg cucu gggu cacacu cgua  u
ccau   u    c    c      u    ga 


Annotation confidence Not enough data
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Genome context
Cbre_Contig36: 499331-499391 [+]

Database links

Mature cbn-lin-4

Accession MIMAT0029734
Description Caenorhabditis brenneri cbn-lin-4 mature miRNA
Sequence 1 - UCCCUGAGACCUCAAGUGUGA - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508