Stem-loop cbn-mir-239d-2

Accession

MI0024903

Description

Caenorhabditis brenneri cbn-mir-239d-2 precursor miRNA

Gene family

MIPF0000135; mir-239

Sequence

UUUGUACCGAUUAUAGGCAACUGAuuuagagaguuuucagugccuauuucaguacaaua
.((((((.((..(((((((.((((............))))))))))).)).))))))..

Structure

-U      C  UU       A    uuuag 
  UUGUAC GA  AUAGGCA CUGA     a
  |||||| ||  ||||||| ||||      
  aacaug cu  uauccgu gacu     g
au      a  -u       -    uuuga 

Annotation confidence Not enough data

Genome context

Cbre_Contig91: 360892-360950 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from cbn-mir-239d-2

Mature cbn-miR-239d

• Accession: MIMAT0029730
• Description: Caenorhabditis brenneri cbn-miR-239d mature miRNA
• Sequence: 1 - UUUGUACCGAUUAUAGGCAACUGA - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508