miRBase entry: cbn-mir-64l

Stem-loop cbn-mir-64l

Accession

MI0024861

Description

Caenorhabditis brenneri cbn-mir-64l precursor miRNA

Sequence

UAUGACAAUCAAAUCUAAGUCAgaguaacaucaaacugacuuaugucugguugucaaagu
..(((((((((.((.((((((((............)))))))).)).)))))))))....

Structure

--UA         A  C        aguaa 
    UGACAAUCA AU UAAGUCAg     c
    ||||||||| || ||||||||      
    acuguuggu ug auucaguc     a
ugaa         c  u        aaacu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

Cbre_Contig274: 37788-37847 [-]

Clustered miRNAs

13 other miRNAs are < 10 kb from cbn-mir-64l

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-64l

Accession	MIMAT0029709
Description	Caenorhabditis brenneri cbn-miR-64l mature miRNA
Sequence	1 - UAUGACAAUCAAAUCUAAGUCA - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508