Stem-loop cbn-mir-64k-1

Accession

MI0024860

Description

Caenorhabditis brenneri cbn-mir-64k-1 precursor miRNA

Gene family

MIPF0000295; mir-64

Sequence

UAUGACACUGGGACGGUUAGGAaccgaacacagcuguguuuccuaaacgcagcagugucguaaa
((((((((((...((..((((((....((((....))))))))))..))...))))))))))..

Structure

--          GGA  GU      ccga    a 
  UAUGACACUG   CG  UAGGAa    acac g
  ||||||||||   ||  ||||||    ||||  
  augcugugac   gc  auccuu    ugug c
aa          gac  aa      ----    u 

Annotation confidence Not enough data

Genome context

Cbre_Contig274: 37911-37974 [-]

Clustered miRNAs

13 other miRNAs are < 10 kb from cbn-mir-64k-1

Mature cbn-miR-64k

• Accession: MIMAT0029708
• Description: Caenorhabditis brenneri cbn-miR-64k mature miRNA
• Sequence: 1 - UAUGACACUGGGACGGUUAGGA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508